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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs145596012 chr10:81871718 G/A 0.000141 488 15.97 15.9 9.77 KM Plot
THCA rs145639141 chr19:43587671 C/T 0.000256 483 15.32 19.57 10.08 KM Plot
THCA rs145865397 chr1:91849277 GT/G 8.4E-6 487 15.68 17 17.77 KM Plot
THCA rs1459923 chr3:67879094 T/C 0.000252 486 15.68 17.6 14.03 KM Plot
THCA rs146017063 chr16:2956766 T/C 0.000174 484 15.47 16.83 15.4 KM Plot
THCA rs146027294 chr7:89708855 TGTGA/T 9.27E-7 482 16.33 13.97 16.07 KM Plot
THCA rs146214764 chr19:53673220 T/C 3.49E-6 468 16.2 16.65 11.73 KM Plot
THCA rs146250260 chr5:1611429 T/C 3.91E-8 484 15.48 16.47 18.97 KM Plot
THCA rs146301852 chr6:24425177 CTG/C 6.22E-15 487 16.33 14.85 11.07 KM Plot
THCA rs146331645 chr8:12872816 AC/A 0 490 16.07 14.47 13.33 KM Plot
THCA rs146341136 chr1:16347185 G/A 1.79E-11 482 15.2 18.63 12.63 KM Plot
THCA rs146397328 chr16:2961888 G/GA 0.000193 486 15.2 17.3 15.4 KM Plot
THCA rs146490262 chr16:69852212 G/A 0.000174 487 16.23 10.62 18.18 KM Plot
THCA rs146525689 chr8:52443457 A/ACTT 0 485 16.48 14.67 7.3 KM Plot
THCA rs146560299 chr19:43588582 G/A 0.00021 487 15.33 18.93 10.08 KM Plot